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Cheap flights from Juba to Mogadishu

Juba
JUB
Mogadishu
MGQ

Flight deals from Juba to Mogadishu

Below you can see the best deals on flights Juba — Mogadishu for upcoming dates. Direct and connecting flights from various airlines — compare prices and choose the right ticket.

Top 10 cheap flights from Juba to Mogadishu

About the Juba — Mogadishu flight

On this page, you can find and purchase flights from Juba to Mogadishu. The flight between the capitals of South Sudan and Somalia covers a distance of 1,560 km, connecting two important administrative centers of the region.

Ticket prices are based on offers from airlines such as African Express Airways and other regional carriers. Prices are dynamic, so to choose the best option, use the low price calendar and check information on how to get to the airport in Juba or travel to the city center upon arrival in Mogadishu.

Flight ticket prices by day: Juba — Mogadishu

Below is a calendar of the lowest flight ticket prices for Juba — Mogadishu by day. Pick a convenient date and instantly see the fare. To view round-trip fares, switch to the "Round trip" tab above the calendar, select your departure date — and the right-hand calendar will highlight the lowest prices for return flights on each day.

 
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Prices by month

Juba → Mogadishu, average one-way price

MonthAverage priceLevelMonthAverage priceLevelMonthAverage priceLevel
Jan$704mediumMay$667lowSep$654low
Feb$654lowJun$755highOct$679medium
Mar$641lowJul$792highNov$692medium
Apr$679mediumAug$767highDec$805high

Some values are estimated based on seasonality.

When to fly

The climate in Mogadishu is characterized by consistently high temperatures, peaking in March (up to 32.7°C). The wettest periods are in April and November, when the number of rainy days increases to 16–17 per month, which may affect travel comfort.

Given the absence of fixed seasonal discounts on this route, it is recommended to track ticket prices in real-time. Prices often depend on the operational load of regional airlines, so using the price trend chart will help you find the most favorable time to book.

The best months for planning a flight are January and February. These are the driest months of the year with minimal chance of precipitation and stable sunny weather, ensuring the most reliable conditions for flights without weather-related delays.

Temperature · Mogadishu

Dry and wet days · Mogadishu

Wind speed and direction · Mogadishu

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How to get the best deal on a Juba — Mogadishu ticket

  • Consider flight options with layovers in Nairobi or Addis Ababa, as direct connections on this route may be limited and more expensive.
  • Book your flights 4–6 weeks in advance: due to regional specifics, flight capacity is limited, and seats for popular dates sell out quickly.
  • Be sure to check the baggage rules of your chosen airline, as African regional carriers often have strict weight and size limits for carry-on luggage.
  • Use the low price calendar on the page to compare offers for nearby dates — sometimes shifting your departure by 1–2 days can significantly reduce costs.

Airlines

Regional carriers operate on the air route between Juba and Mogadishu, with African Express Airways and Daallo Airlines playing key roles. Most flights are operated with connections, but the frequency of flights allows for flexible travel planning. The current flight schedule and details for each operator are available in the list below.

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Cities and airports on the Juba — Mogadishu route

Flights Juba — Mogadishu depart from Juba International Airport and arrive at Mogadishu International Airport. Below are pages for the cities, countries, and airports on the route: airlines, schedules, and travel guides.

Departure

Juba

JUB
South Sudan
About the cityHow to get thereWeatherAll about the country South Sudan
Arrival

Mogadishu

MGQ
Somalia
About the cityHow to get thereWeatherAll about the country Somalia
Departure airports
Arrival airports

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Frequently asked questions about the Juba — Mogadishu flight

How long is the flight from Juba to Mogadishu?

The approximate flight time is about 2 hours, as the distance between the cities is 1,560 km. The total travel time will depend on the layover duration if a connecting flight is chosen.

Which airlines fly on this route?

Flights are mainly operated by regional carriers such as African Express Airways and Daallo Airlines. A full list of current airlines is provided in the block above.

Are there direct flights between the cities?

Direct air service between Juba and Mogadishu can be irregular. Most routes are built through major East African aviation hubs.

When is the best time to buy tickets?

It is optimal to book tickets in advance, as prices tend to increase closer to the departure date. Current price offers can always be checked in the calendar on this page.

Which airport does the flight arrive at?

All international flights arrive at Aden Adde International Airport (MGQ) in Mogadishu.

Where else you can fly from Juba

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Addis Ababa

Where else you can fly from Mogadishu

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Addis AbabaEntebbeIstanbulDjibouti CityNairobi

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