Cheap flights from Manila to El Nido

Ninoy Aquino
MNL
El Nido
ENI

Flight deals from Manila to El Nido

Below you can see the best deals on flights Manila — El Nido for upcoming dates. Direct and connecting flights from various airlines — compare prices and choose the right ticket.

The lowest price for the next 2 months is on 5 September, from $65.

Top 10 cheap flights from Manila to El Nido

Z2
DG
$ 91

Manila — El Nido

17:50—17:00
9 Sep 2026
23 h 10 m
1 stop
Z2
DG
$ 91

Manila — El Nido

16:40—17:00
9 Sep 2026
24 h 20 m
1 stop
Z2
DG
$ 95

Manila — El Nido

09:30—17:00
9 Sep 2026
31 h 30 m
1 stop
Z2
DG
$ 96

Manila — El Nido

17:50—17:00
13 Sep 2026
23 h 10 m
1 stop
Z2
DG
$ 96

Manila — El Nido

16:40—17:00
13 Sep 2026
24 h 20 m
1 stop
5J
DG
$ 98

Manila — El Nido

05:50—17:00
10 Sep 2026
11 h 10 m
1 stop
5J
DG
$ 98

Manila — El Nido

14:35—17:00
13 Sep 2026
26 h 25 m
1 stop
5J
DG
$ 98

Manila — El Nido

05:50—17:00
13 Sep 2026
35 h 10 m
1 stop
5J
DG
$ 100

Manila — El Nido

17:25—17:00
9 Sep 2026
23 h 35 m
1 stop
Z2
DG
$ 100

Manila — El Nido

09:30—17:00
13 Sep 2026
31 h 30 m
1 stop

Prices were found in the last 72 hours and may change — check the exact price when you continue.

About the Manila — El Nido flight

Looking for cheap flights from Manila to El Nido? Compare fares from different airlines, check the flight schedule and travel time — and book your Manila — El Nido ticket online at the best price.

The route has direct flights — around 61 flights per week, flights are operated by AirSWIFT, a nonstop flight takes about 4 h 15 min, the distance between the cities is around 413 km.

Planning your trip? You may find our El Nido travel guide, how to get from the airport into town and El Nido weather forecast useful. To catch a low fare, use the low-price calendar and the monthly price chart on this page.

Facts about this route

from $65Min. price
SeptemberCheapest
MayPeak season
YesDirect flights
413 kmDistance
4 h 15 minTravel time
1Airlines
61 / wkFlights

Flight schedule from Manila to El Nido

The table shows direct flights from Manila to El Nido on the selected date. The flight takes approximately 4 h 15 min. Regular flights are operated by AirSWIFT. Departures from Ninoy Aquino International Airport airports, arrivals at El Nido.

For each flight, the following details are shown: departure time (local), arrival city and airport, flight number and airline, terminal or gate, and status. Click on a flight to open its details and go to ticket search. To view flights on a different day, change the date above the table.

Today
Any time
Last update: 14 Aug 2026

Flight ticket prices by day: Manila — El Nido

Below is a calendar of the lowest flight ticket prices for Manila — El Nido by day. Pick a convenient date and instantly see the fare. The cheapest flights on this route start from $65 in September, and the most expensive are around $157 in May. If your travel dates are flexible, the calendar will help you find the best price for your preferred period. To view round-trip fares, switch to the "Round trip" tab above the calendar, select your departure date — and the right-hand calendar will highlight the lowest prices for return flights on each day.

 
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Prices by month

Average one-way fares from Manila to El Nido by month. Tickets are usually cheapest in August (around $82) and priciest in December (about $131) — use the table and chart below to pick the best time to fly.

MonthAverage priceLevelMonthAverage priceLevelMonthAverage priceLevel
Jan$127highMay$103mediumSep$87medium
Feb$121highJun$94mediumOct$94medium
Mar$115highJul$85lowNov$100medium
Apr$109highAug$82lowDec$131high

Some values are estimated based on seasonality.

When to fly

Weather in El Nido: it is warmest in May (up to 30 °C on average) and coolest in January (around 28 °C). The driest month is March.

Tickets are usually cheapest in September and most expensive in May. Compare prices and weather by month in the charts below to pick the best time to fly.

Temperature · El Nido

Dry and wet days · El Nido

Wind speed and direction · El Nido

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How to get the best deal on a Manila — El Nido ticket

  • Book ahead: fares for Manila — El Nido are usually lower 3–8 weeks before departure than at the last minute.
  • Play with your dates — Tuesday, Wednesday and Saturday departures are often cheaper than Friday and Sunday.
  • The cheapest month to fly to El Nido is usually September — plan your trip around it if your dates are flexible.
  • Compare direct and connecting flights: nonstop is faster, while a connection is sometimes noticeably cheaper.
  • Watch the low-price calendar and the monthly price trend on this page — they make it easier to catch a good date.
  • Travelling light? Pick a cabin-baggage-only fare — tickets without checked luggage are noticeably cheaper.
  • Get to the airport in good time — about 2–3 hours before an international departure and roughly an hour before a domestic one.

Airlines

Flights on the Manila — El Nido route are operated by 1 airline; AirSWIFT runs the most flights (around 100% of all flights). Compare carriers, flight shares and schedules below.

  • AirSWIFTT6
    20x/week
    WebsiteFleet: 5250k pax/year
    • Direct flight MNL → ENI20x/week
      Duration
      1h 30m
      Days
      MTWTFSS
    100.0%Open →

Cities and airports on the Manila — El Nido route

Flights Manila — El Nido depart from Ninoy Aquino International Airport and arrive at El Nido. Below are pages for the cities, countries, and airports on the route: airlines, schedules, and travel guides.

Departure

Manila

MNL
Philippines
About the cityHow to get thereWeatherAll about the country Philippines
Arrival

El Nido

ENI
Philippines
About the cityHow to get thereWeatherAll about the country Philippines
Departure airports
Arrival airports

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Frequently asked questions about the Manila — El Nido flight

How long is the flight from Manila to El Nido?

A nonstop Manila — El Nido flight takes about 4 h 15 min — the distance between the cities is around 413 km.

How far is it from Manila to El Nido?

The distance from Manila to El Nido is about 413 km, which a nonstop flight covers in around 4 h 15 min.

Are there direct flights from Manila to El Nido?

Yes, there are nonstop flights Manila — El Nido — around 61 flights per week.

Which airlines fly from Manila to El Nido?

Airlines operating Manila — El Nido include AirSWIFT. See the full list with schedules in the "Airlines" section on this page.

Which airports do Manila — El Nido flights use?

Flights from Manila depart from Ninoy Aquino International Airport, and arrive at El Nido. If a city has more than one airport, check which one your ticket uses before you travel.

How much is a ticket from Manila to El Nido?

The price of a Manila — El Nido ticket depends on your travel date, season and demand: it is usually cheapest to fly in September, and most expensive in May. Tickets typically cost between $65 and $157. Check the current lowest fare and low-price calendar on this page.

When is the best time to book flights Manila — El Nido?

Flights Manila — El Nido are usually cheaper when booked in advance — a few weeks before departure and away from peak dates; the most budget-friendly month to fly is September. Compare prices by month in the price trend chart on this page.

How can I find the cheapest flights from Manila to El Nido?

To catch a low fare Manila — El Nido, book a few weeks in advance, keep your dates flexible, and compare airlines and connecting options. The low-price calendar and monthly price chart on this page show the cheapest days and months at a glance: the most budget-friendly month to fly is usually September.

How early should I arrive at the airport?

For international flights, plan to be at the airport about 2–3 hours before departure, and around an hour before a domestic flight. Allow extra time during busy travel seasons and at large hubs, where check-in and security lines can be longer.

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