Cheap flights from Panama City to San Juan

Tocumen
PTY
Luis Muñoz Marín
SJU

Flight deals from Panama City to San Juan

Below you can see the best deals on flights Panama City — San Juan for upcoming dates. Direct and connecting flights from various airlines — compare prices and choose the right ticket.

The lowest price for the next 2 months is on 17 September, from $156.

Top 10 cheap flights from Panama City to San Juan

CM
DM
DM
$ 391

Panama City — San Juan

06:49—16:39
28 Aug 2026
32 h 50 m
2 stops
CM
DM
DM
$ 403

Panama City — San Juan

15:29—16:39
28 Aug 2026
24 h 10 m
2 stops
CM
AV
$ 405

Panama City — San Juan

06:50—15:15
2 Sep 2026
7 h 25 m
1 stop
CM
AV
$ 405

Panama City — San Juan

13:20—15:15
2 Sep 2026
24 h 55 m
1 stop
CM
AV
$ 405

Panama City — San Juan

09:30—15:15
2 Sep 2026
28 h 45 m
1 stop
CM
AV
$ 405

Panama City — San Juan

08:15—15:15
2 Sep 2026
30 h
1 stop
CM
AV
$ 405

Panama City — San Juan

06:50—15:15
2 Sep 2026
31 h 25 m
1 stop
CM
AV
$ 405

Panama City — San Juan

13:19—15:15
26 Aug 2026
24 h 56 m
1 stop
CM
AV
$ 405

Panama City — San Juan

08:14—15:15
26 Aug 2026
30 h 1 m
1 stop
CM
AV
$ 405

Panama City — San Juan

06:49—15:15
26 Aug 2026
31 h 26 m
1 stop

Prices were found in the last 72 hours and may change — check the exact price when you continue.

About the Panama City — San Juan flight

Looking for cheap flights from Panama City to San Juan? Compare fares from different airlines, check the flight schedule and travel time — and book your Panama City — San Juan ticket online at the best price.

The route has direct flights — around 35 flights per week, flights are operated by Copa Airlines, a nonstop flight takes about 2 h 53 min, the distance between the cities is around 1,790 km.

Planning your trip? You may find our San Juan travel guide, how to get from the airport into town and San Juan weather forecast useful. To catch a low fare, use the low-price calendar and the monthly price chart on this page.

Facts about this route

from $156Min. price
SeptemberCheapest
DecemberPeak season
YesDirect flights
1,790 kmDistance
2 h 53 minTravel time
1Airlines
35 / wkFlights

Flight schedule from Panama City to San Juan

The table shows direct flights from Panama City to San Juan on the selected date. The flight takes approximately 2 h 53 min. Regular flights are operated by Copa Airlines. Departures from Tocumen International Airport and Marcos A. Gelabert International Airport airports, arrivals at Luis Muñoz Marín International Airport.

For each flight, the following details are shown: departure time (local), arrival city and airport, flight number and airline, terminal or gate, and status. Click on a flight to open its details and go to ticket search. To view flights on a different day, change the date above the table.

Today
Any time
Last update: 14 Aug 2026

Flight ticket prices by day: Panama City — San Juan

Below is a calendar of the lowest flight ticket prices for Panama City — San Juan by day. Pick a convenient date and instantly see the fare. The cheapest flights on this route start from $156 in September, and the most expensive are around $488 in December. If your travel dates are flexible, the calendar will help you find the best price for your preferred period. To view round-trip fares, switch to the "Round trip" tab above the calendar, select your departure date — and the right-hand calendar will highlight the lowest prices for return flights on each day.

 
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Prices by month

Average one-way fares from Panama City to San Juan by month. Tickets are usually cheapest in September (around $456) and priciest in December (about $720) — use the table and chart below to pick the best time to fly.

MonthAverage priceLevelMonthAverage priceLevelMonthAverage priceLevel
Jan$696highMay$564mediumSep$456low
Feb$708highJun$528mediumOct$468low
Mar$684highJul$516mediumNov$552medium
Apr$660highAug$480lowDec$720high

Some values are estimated based on seasonality.

When to fly

Weather in San Juan: it is warmest in August (up to 30 °C on average) and coolest in February (around 27 °C). The driest month is January.

Tickets are usually cheapest in September and most expensive in December. Compare prices and weather by month in the charts below to pick the best time to fly.

Temperature · San Juan

Dry and wet days · San Juan

Wind speed and direction · San Juan

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How to get the best deal on a Panama City — San Juan ticket

  • Book ahead: fares for Panama City — San Juan are usually lower 3–8 weeks before departure than at the last minute.
  • Play with your dates — Tuesday, Wednesday and Saturday departures are often cheaper than Friday and Sunday.
  • Panama City is served by more than one airport — compare fares and travel time to each before you book.
  • The cheapest month to fly to San Juan is usually September — plan your trip around it if your dates are flexible.
  • Compare direct and connecting flights: nonstop is faster, while a connection is sometimes noticeably cheaper.
  • Watch the low-price calendar and the monthly price trend on this page — they make it easier to catch a good date.
  • Travelling light? Pick a cabin-baggage-only fare — tickets without checked luggage are noticeably cheaper.
  • Get to the airport in good time — about 2–3 hours before an international departure and roughly an hour before a domestic one.

Airlines

Flights on the Panama City — San Juan route are operated by 1 airline; Copa Airlines runs the most flights (around 100% of all flights). Compare carriers, flight shares and schedules below.

  • Copa AirlinesCM
    12x/week
    WebsiteFleet: 10316.1M pax/year
    • Direct flight PTY → SJU12x/week
      Duration
      2h 53m
      Days
      MTWTFSS
    100.0%Open →

Cities and airports on the Panama City — San Juan route

Flights Panama City — San Juan depart from Tocumen International Airport and Marcos A. Gelabert International Airport and arrive at Luis Muñoz Marín International Airport. Below are pages for the cities, countries, and airports on the route: airlines, schedules, and travel guides.

Departure

Panama City

PTY
Panama
About the cityHow to get thereWeatherAll about the country Panama
Arrival

San Juan

SJU
Puerto Rico
About the cityHow to get thereWeatherAll about the country Puerto Rico
Departure airports
Arrival airports

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Frequently asked questions about the Panama City — San Juan flight

How long is the flight from Panama City to San Juan?

A nonstop Panama City — San Juan flight takes about 2 h 53 min — the distance between the cities is around 1,790 km.

How far is it from Panama City to San Juan?

The distance from Panama City to San Juan is about 1,790 km, which a nonstop flight covers in around 2 h 53 min.

Are there direct flights from Panama City to San Juan?

Yes, there are nonstop flights Panama City — San Juan — around 35 flights per week.

Which airlines fly from Panama City to San Juan?

Airlines operating Panama City — San Juan include Copa Airlines. See the full list with schedules in the "Airlines" section on this page.

Which airports do Panama City — San Juan flights use?

Flights from Panama City depart from Tocumen International Airport, Marcos A. Gelabert International Airport, and arrive at Luis Muñoz Marín International Airport. If a city has more than one airport, check which one your ticket uses before you travel.

How much is a ticket from Panama City to San Juan?

The price of a Panama City — San Juan ticket depends on your travel date, season and demand: it is usually cheapest to fly in September, and most expensive in December. Tickets typically cost between $156 and $488. Check the current lowest fare and low-price calendar on this page.

When is the best time to book flights Panama City — San Juan?

Flights Panama City — San Juan are usually cheaper when booked in advance — a few weeks before departure and away from peak dates; the most budget-friendly month to fly is September. Compare prices by month in the price trend chart on this page.

How can I find the cheapest flights from Panama City to San Juan?

To catch a low fare Panama City — San Juan, book a few weeks in advance, keep your dates flexible, and compare airlines and connecting options. The low-price calendar and monthly price chart on this page show the cheapest days and months at a glance: the most budget-friendly month to fly is usually September.

How early should I arrive at the airport?

For international flights, plan to be at the airport about 2–3 hours before departure, and around an hour before a domestic flight. Allow extra time during busy travel seasons and at large hubs, where check-in and security lines can be longer.

Where else you can fly from Panama City

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Where else you can fly from San Juan

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OrlandoNew York CityFort LauderdalePhiladelphiaMiamiSanto DomingoPunta CanaAtlantaDallasCharlotte AmalieChicagoTampaHoustonWashington, D.C.BostonTortolaHartfordMadridMedellínGustaviaCharlotteBogotaSaint CroixJacksonvilleViequesMexico CityDetroitSan AntonioRaleighTorontoDominicaClevelandVirgin GordaCulebraSan JoséSantiagoProvidenceMinneapolisThe ValleyMontreal

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